| RNAstructure Classes Version 6.2

### - a -

- add_branch() : ProbScan.cpp , ProbScan.h

### - b -

- basestack() : ProbScan.cpp , ProbScan.h

### - e -

- equal_within_tolerance() : thermodynamics.cpp
- errmsg() : RNA.cpp

### - f -

- file_exists() : Multilign_object.cpp

### - h -

- hairpin() : ProbScan.cpp , ProbScan.h

### - i -

- internal_loop() : ProbScan.cpp , ProbScan.h

### - m -

- main() : Dynalign_class.cpp , DynalignSMP_class.cpp , HybridRNA_class.cpp , OligoWalk_class.cpp , RNA_class.cpp
- multibranch_loop() : ProbScan.cpp , ProbScan.h

### - p -

- pow() : design.h
- prev_val() : ProbScan.cpp

### - s -

- show_bulge_loops() : ProbScan.cpp , ProbScan.h
- show_hairpins() : ProbScan.cpp , ProbScan.h
- show_internal_loops() : ProbScan.cpp , ProbScan.h
- show_mb_element_array() : ProbScan.cpp , ProbScan.h
- show_mbl() : ProbScan.cpp , ProbScan.h
- show_stacks() : ProbScan.cpp , ProbScan.h